ECG Denoising with Wavelet Transform Methods : A Survey

ECG Denoising with Wavelet Transform Methods : A Survey

ECG Denoising With Wavelet Transform Methods : A Survey

Miss. Mugdha R. Madane,

M. E. Electronics (II), Department of Electronics Engineering; KIT college of Engineering, Kolhapur, Dist-KOLHAPUR; Maharashtra, India

Abstract-This paper introduces applications of Matlab for biomedical application such as ECG Noise reduction. The goal of ECG denoising is recover the ECG signal with minimum distortion. Paper describes the various denoising algorithms such as wavelet packet transform, lifting wavelet transform etc.and later on comparison. It gives the idea of de-nosing algorithms.

Key words: ECG; de-noising; wavelet packet transform; lifting wavelet transform.

I.INTRODUCTION

The Electrocardiogram (ECG) is a technique of recording bioelectric currents generated by the heart which will help doctors to evaluate the conditions of a patients heart. So it is important to get the parameters of ECG signal clear without noise. The goal of denoising is decreasing the noise and increasing SNR; while preserving as much of the information in the signal as possible.

The morphology of ECG signal has been used for recognising much variability's of heart activity, so it is important to get the parameters of ECG signal clear without noise .This step gives a full picture and detailed information about the electrophysiology of the heart diseases and the ischemic changes that may occur like the myocardial infarction, conduction defects and arrhythmia. Spatial filters have long been used as the traditional means of removing noise from images and signals. These filters usually smooth the data to reduce the noise, but, in the process data may blur. Now a days several new techniques have been developed that improve on spatial filters by removing the noise more effectively while preserving the edges in the data.

An efficient technique for such a non-stationary signal processing is the wavelet transform. The wavelet transform can be used for decomposition of a signal in the time frequency scale plane. Many application areas of wavelet transform are available like as sub-band coding data compression, noise reduction and characteristic points detection. In order to reduce the noise of ECG signal many techniques are available like digital filters (FIR or IIR),

adaptive methods etc. However, digital filters and adaptive methods can be applied to signal whose statistical characteristics are stationary in many cases. Now days the wavelet transforms has been proven to be useful tool for non-stationary signal analysis. There are different class of methods that exploit the decomposition of the data into the wavelet basis and shrink the wavelet coefficients in order to de-noise the data [5].

1. LETRATURE REVIEW

   Wavelet transform (WT), due to its sparsity, locality, and multi-resolution nature, has emerged as a simply yet effective de-noising tool. Wavelet packet transform, Coif wavelet, lifting wavelet transform are also used as denoising tool. Much related work has been carried out for applications in de-noising ECG signals.Tikkanen

   [1] evaluated the performance of different wavelet-based and wavelet packet-based thresholding methods for removing noise from the ECG. Coif wavelet and wavelet packet transforms (WPT) were used to build up the dyadic wavelet and optimized wavelet packet decompositions. Kuzume K. et al [2] presented the realization of a lifting wavelet processor, which used an integer type Haar lifting wavelet transform (LWT) to measure ECG signals in real time.Sai,R. et al [3]adopted Db4 lifting wavelet transform to reconstruct ECG signals

   Ercelebi, E. [4] proposed a lifting-based discrete wavelet transform to de-noise ECG signals. Through testing with Haar, Db4, Db6, Filter(9-7), and Cubic B- splines, Db4 decomposition in 4 scales with level- dependent threshold estimator can get best SNR and visual inspection in de-noising.De-noising using Wavelet Shrinkage has a translation variance problem, so the following algorithms tried to solve this problem. Kumari,

   R.S.S. et al [5] used Cyclic Shift Tree De-noising technique for reducing white Gaussian noise or random noise, EMG noise and Power line Interference

   Su, L. et al [6] employed Translation-Invariant (TI) method to de-noise ECG signals Suyi Li , Guangda Liu and Zhenbao Lin [7]proposed de-noising algorithms based on wavelet packet (WPT), lifting wavelet (LWT) and

   stationary wavelet transform (SWT) for de-noising ECG signals, respectively. Mohammad Ayat, Mohammad B. Shamsollahi [8] proposed a method for removing white Gaussian noise from ECG signals. The concepts of singularity and local maxima of the wavelet transform modulus were used for analyzing singularity and reconstructing the ECG signal. V.Naga Prudhvi Raj, Dr T Venkateswarlu [9] proposed the denoising method which uses Undecimated Wavelet Transform to decompose the raw ECG signal and we performed the shrinkage operation to eliminate the noise from the noisy signal.

2. DEFFERENT METHEDOLOGYS:

   1. Discrete Wavelet Transform

      The DWT of a signal is calculated by passing it through a series of filters. First the samples are passed through a low pass filter with impulse response which gives the convolution of two signals. This decomposition has halved the time resolution since only half of each filter output characteristics the signal.

   2. UNDECIMATED WAVELET TRANSFORM

   In DWT the decimation step removes every other of the coefficients of the current level. Thus the computation of the wavelet transform is faster and more compact in terms of storage space. More importantly, the transformed signal can be perfectly reconstructed from the remaining coefficients. Unfortunately, the decimation is causing shift variance of the wavelet transform. Unlike the discrete wavelet transform (DWT), the undecimated wavelet transform (UWT) does not incorporate the down sampling operations.

   Thus, the approximation coefficients and detail coefficients at each level are the same length as the original signal. An UWT up samples the coefficients of the low pass and high pass filters at each level. This up sampling operation is equivalent to dilating wavelets. Resolution of the UWT coefficients decreases with increasing levels of decomposition. By comparing the UWT with the DWT, so UWT has some unique features such as Translation- Invariant Property, Better Denoising Capability and Better Peak Detection Capability [5]

   WAVELET PACKET TRANSFORM (WPT)

   The only difference between wavelets and wavelet packets is that wavelet packets offer a more complex and flexible analysis, because in wavelet packet analysis, the details as well as the approximations are split. De-noising and compression are interesting applications of wavelet packet analysis. The wavelet packet de-noising or compression procedure involves four steps:

   1. Decomposition

      For a given wavelet, compute the wavelet packet decomposition of signal x at level N.

   2. Computation of the best tree

      For given entropy, compute the optimal wavelet packet tree. Of course, this step is optional.

   3. Thresholding of wavelet packet coefficients

      For each packet (except for the approximation), select a threshold and apply thresholding to coefficients.

   4. Reconstruction Compute wavelet packet reconstruction based on the original approximation coefficients at level N and the modified coefficients [1].

      LIFTING WAVELET TRANSFORM (LWT)

      It allows you to generate an infinite number of discrete biorthogonal wavelet starting from an initial one, is a spatial domain construction of biorthogonal wavelets, and it does not rely on the Fourier transform . The principle of lifting is to generate from a given biorthogonal quadruplet a new one by applying a finite sequence of primal or dual elementary lifting steps (ELS) [1].

      MODULUS MAXIMA OF WAVELET TRANSFORM

      This method is for removing white Gaussian noise from ECG signals. Main concepts of singularity and local maxima of the wavelet transform modulus were used for analyzing singularity and reconstructing the ECG signal. The Adaptive thresholding was used to remove white Gaussian noise modulus maximum of wavelet transform and then reconstruct the signal [6].

      STATIONARY WAVELET TRANSFORM (SWT)

      The SWT is similar to the classical discrete WT (DWT) except the signal is never sub-sampled and instead the filters are up-sampled at each level of decomposition, also be called at TI, Shifted Invariant, etc. The definition of SWT is to average some slightly different DWT, called – decimated DWT [1].

3. PROPOSED BLOCK DIAGRAM

   Figure.1. Block Diagram for Proposed System

   Figure .1.shows the block diagram for the proposed work in step by step mannar.The first block represent the input data as ECG signal applied to the Wavelet Packet Transform algorithm, similarly it is applied to the Lifting Wavelet Transform algorithm also. Then follow the algorithm processes and finally reconstruction of signal is done. As per block diagram, following are the units:

   Input Signal:

   The very First input is the ECG signal from the database, which is applied to the algorithms for further produre of de-noising.

   Algorithms:

   Using Matlab as a simulation software tool its Wavelet Packet Transform and Lifting Wavelet Transform functions are considered for this step.

   Algorithms process: Step1:

   1. Decomposition:

   For a given wavelet, decomposition of signal is to be done in wavelet transform.

   (b) Computation of the best tree:

   For given entropy, compute the optimal wavelet packet tree. This step is optional.

   c) Thresholding of wavelet packet coefficients

   For packet (except for the approximation), select a threshold and apply thresholding to coefficients.

   (d) Reconstruction:

   Then reconstruction of ECG signals after de-noising.

   e) Comparison:

   Comparison of algorithms outputs for getting better results.

   1. SOFTWARE MODULE Software Development Tools:-

      Due to variability' of applications Matlab is mainly used for this biomedical application. The special focus will be given to Wavelet Transform methods. In Wavelet Transform use of Wavelet Packet Transform and Lifting Wavelet Transform is considered.

      Matlab:

      Matlab is simulation software which contains variety of toolboxes for different applications.

      Why Wavelet Transform?

      Wavelet transform (WT), due to its sparsely, locality, and multi-resolution nature, has emerged as a simply yet effective de-noising tool. Lots of work has been done for applications in de-noising ECG signals.

      Wavelet Packet Transform:

      The only difference between wavelets and wavelet packets is that wavelet packets offer a more complex and flexible analysis, because in wavelet packet analysis, the details as well as the approximations are split.

      Lifting Wavelet Transform:

      It allows you to generate an infinite number of discrete biorthogonal wavelets starting from an initial one, is a spatial domain construction of biorthogonal wavelets, and it does not rely on the Fourier transform

      Database:

      ECG database which is the signal undergoes in denoising process.

      Personal computer:

      Personal computer with installation of MATLAB software for the project.

   2. CONCLUSION

      In this paper, we have proposed ECG feature extraction system based on wavelet packet transform And Lifting wavelet transform for the extraction noise. This wavelet technique provides better accuracy for, analysis, classification and characterization of normal and abnormal patterns of ECG.

      The system was implemented using Matlab wavelet tools. This feature extraction system can be used as a measurement tool for automatic and on line disease classification such as the hand handled ECG recorder device online in telemedicine system.

   3. ACKNOWLEDGMENT

I am using this opportunity to express my gratitude to everyone who supported me for writing this review paper. I am thankful for their guidance and invaluably advice during this work. I am sincerely grateful to them for sharing their truthful and illuminating views on a number of issues related to this paper.

I express my warm thanks to Prof. Manasi R. Dixit for his support and guidance at Department of Electronics Engineering; Kolhapur Institute of Technology College of engineering, Kolhapur; Maharashtra, India.

REFERENCES

1. Suyi Li , Guangda Liu and Zhenbao Lin Comparisons of wavelet packet, lifting wavelet and stationary wavelet transform for de-noising ECG 2009 IEEE

2. Su, L., Zhao, G., De-noising of ECG signal using translation-Invariant wavelet de-noising method with improved thresholding, Annual International Conference of the IEEE Engineering in Medicine and Biology – Proceedings 7 VOLS, art. no. 1615845, 2005, pp. 5946-5949.

3. Sai,R.,Ben Messaoud,M.,Kachouri,A.,Sellami, F., Analysis of the electrocardiogram signal by the lifting scheme, International Symposium on Control, Communications and Signal Processing, ISCCSP, 2004, pp. 263-266.

4. Rangaraj M. Rangayyan, Biomedical Signal Analysis A Case study Approach, IEEE Press, 2005

5. V.Naga Prudhvi Raj ,Dr T Venkateswarlu ECG Signal Denoising Using Undecimated Wavelet Transform 2011 IEEE

6. Mohammad Ayat,Mohammad B. Shamsollahi ECG Denoising Using Modulus Maxima of Wavelet Transform 31st Annual International Conference of the IEEE 2009.